EST Expression (ESTs/100,000 ESTs) of Developing Oil Seeds, Based on Pyrosequencing
(For further information, see:
Troncoso-Ponce MA, Kilaru A, et al (2011) Comparative deep transcriptional profiling of four developing
oilseeds. Plant J)
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| Brassica napus Embryo (Em) Stages (Days After Flowering (DAF)) | Ricinus communis Endosperm (En) Stages & Embryo (Em) | Euonymus alatus Endosperm (En) Stages & Embryo (Em) | Tropaeolum majus Embryo (Em) Stages (Days post antithesis (DPA)) | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus ID | Abbrev. | Em I 14-20 DAF |
Em II 21-25 DAF |
Em III 25-30 DAF |
Em IV 31-35 DAF |
En I Stage III |
En II Stage IV |
En III Stage VI |
En IV Stages VII-VIII |
Em | En I Stage IV |
En II Stage VI |
En III Stages VII-VIII |
En IV Stages 9/19 |
Em | Em I 16 DPA |
Em II 18 DPA |
Em III 22 DPA |
Em IV 25 DPA |
| At1g01610 | sn-2-GPAT4 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | ||||
| At1g02390 | GPAT2 | 0 | 0 | 0 | 0 | ||||||||||||||
| At1g06520 | sn-2-GPAT1 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| At1g32200 | ATS1 / ACT1 | 5 | 3 | 2 | 1 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 0 | 0 |
| At2g38110 | sn-2-GPAT6 | 10 | 8 | 18 | 22 | 6 | 0 | 1 | 2 | 4 | |||||||||
| At3g11430 | sn-2-GPAT5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||||
| At4g00400 | sn-2-GPAT8 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 4 | 1 | 1 | 5 | 4 | 3 | 3 | 1 | 6 | 3 |
| At4g01950 | GPAT3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | |||||
| At5g60620 | GPAT9? (mammalian homologue) | 4 | 3 | 3 | 2 | 16 | 9 | 9 | 1 | 9 | 7 | 6 | 7 | 3 | 7 | 3 | 2 | 2 | 2 |